Transcript: LINC01583:5

Basic information

LNCipedia transcript ID: LINC01583:5 
HGNC Gene Symbol: LINC01583    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1583
Ensembl Gene ID: ENSG00000259518
Ensembl Transcript ID: ENST00000557838
Location (hg38): chr15:82088691-82091980
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 292 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000557838.1
Alternative gene names: ENSG00000259518.1; LINC01583;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -204.6312 non-coding 
CPAT coding probability 4.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01583:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC01583:5
4.1 LINC01583:5
5.0 LINC01583:5
5.1 LINC01583:5
5.2 LINC01583:5