Transcript: LINC01586:2

Basic information

LNCipedia transcript ID: LINC01586:2 
HGNC Gene Symbol: LINC01586    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1586
Ensembl Gene ID: ENSG00000249487
Ensembl Transcript ID: ENST00000560368
Location (hg38): chr15:88586774-88605110
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 622 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000560368.1; RP11-97O12.2-002; OTTHUMT00000415446.1; NONHSAT048180
Alternative gene names: ENSG00000249487.2; RP11-97O12.2; OTTHUMG00000171852.1; ENSG00000249487.6; LINC01586; TCONS_00023252


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -56.0123 non-coding 
CPAT coding probability 0.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01586:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DET1-2:2
4.0 LINC01586:2
4.1 LINC01586:2
5.0 LINC01586:2
5.1 LINC01586:2
5.2 LINC01586:2