Transcript: LINC01588:66

Basic information

LNCipedia transcript ID: LINC01588:66 
LNCipedia gene ID: LINC01588
Location (hg38): chr14:50041643-50052911
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 462 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000556019; ENST00000556019.1; RP11-58E21.5-001; OTTHUMT00000410876.1; NONHSAT036780
Alternative gene names: ENSG00000258391; RP11-58E21.5; ENSG00000258391.1; OTTHUMG00000170885.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -50.5327 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01588:66 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-58E21.3.1-1:1
3.1 lnc-RP11-58E21.3.1-1:1
4.0 lnc-C14orf183-1:5
4.1 lnc-C14orf183-1:5
5.0 lnc-C14orf183-1:5
5.1 LINC01588:17
5.2 LINC01588:66