Transcript: LINC01588:85

Basic information

LNCipedia transcript ID: LINC01588:85 
HGNC Gene Symbol: LINC01588    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1588
Ensembl Gene ID: ENSG00000214900
Ensembl Transcript ID: ENST00000399206
Location (hg38): chr14:49981712-50007520
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2686 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000399206.4
Alternative gene names: ENSG00000214900.9; LINC01588


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.0197 non-coding 
CPAT coding probability 10.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01588:85 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C14orf183-1:16
4.1 lnc-C14orf183-1:16
5.0 lnc-C14orf183-1:16
5.1 LINC01588:36
5.2 LINC01588:85