Transcript: LINC01588:95

Basic information

LNCipedia transcript ID: LINC01588:95 
HGNC Gene Symbol: LINC01588    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1588
Ensembl Gene ID: ENSG00000214900
Ensembl Transcript ID: ENST00000556434
Location (hg38): chr14:49927571-49961960
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 892 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000556434; ENST00000556434.1; RP11-58E21.4-001; OTTHUMT00000411890.1; NONHSAT036761; ENST00000556434.5
Alternative gene names: ENSG00000258946; RP11-58E21.4; ENSG00000258946.1; OTTHUMG00000171143.1; ENSG00000214900.9; LINC01588


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.4346 non-coding 
CPAT coding probability 13.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01588:95 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C14orf182-1:3
3.1 lnc-C14orf182-1:1
4.0 lnc-C14orf183-1:26
4.1 lnc-C14orf183-1:26
5.0 lnc-C14orf183-1:26
5.1 LINC01588:48
5.2 LINC01588:95