Transcript: LINC01597:1

Basic information

LNCipedia transcript ID: LINC01597:1 
HGNC Gene Symbol: LINC01597    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1597
Ensembl Gene ID: ENSG00000205611
Ensembl Transcript ID: ENST00000380888
Location (hg38): chr20:30278906-30288479
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4472 bp
Exons: 3
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000380888.4
Alternative gene names: ENSG00000205611.4; LINC01597;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 95.0134 coding 
CPAT coding probability 12.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01597:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LINC01597:1
4.1 LINC01597:1
5.0 LINC01597:1
5.1 LINC01597:1
5.2 LINC01597:1