Transcript: LINC01605:17

Basic information

LNCipedia transcript ID: LINC01605:17 
LNCipedia gene ID: LINC01605
Location (hg38): chr8:37391271-37521509
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 16714 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000253161.1|ENCT00000434467.1
Alternative gene names: TCONS_00014973

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 7.716 non-coding 
CPAT coding probability 6.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01605:17 no no no no

Available literature

  1. Forrest (2018), Colon Cancer-Upregulated Long Non-Coding RNA lincDUSP Regulates Cell Cycle Genes and Potentiates Resistance to Apoptosis., Sci Rep

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LINC01605:17
5.0 LINC01605:17
5.1 LINC01605:17
5.2 LINC01605:17