Transcript: LINC01605:4

Basic information

LNCipedia transcript ID: LINC01605:4 
LNCipedia gene ID: LINC01605
RefSeq ID: NR_121621
Location (hg38): chr8:37516406-37521386
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 528 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_121621; NR_121621.1
Alternative gene names: TCONS_00014973; LINC01605


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -80.0091 non-coding 
CPAT coding probability 14.38% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01605:4 no no no no

Available literature

  1. Forrest (2018), Colon Cancer-Upregulated Long Non-Coding RNA lincDUSP Regulates Cell Cycle Genes and Potentiates Resistance to Apoptosis., Sci Rep


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-150O12.6.1-1:15
4.0 LINC01605:4
4.1 LINC01605:4
5.0 LINC01605:4
5.1 LINC01605:4
5.2 LINC01605:4