Transcript: LINC01614:4

Basic information

LNCipedia transcript ID: LINC01614:4 
LNCipedia gene ID: LINC01614
Location (hg38): chr2:215611376-215804825
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5893 bp
Exons: 20
Sources: NONCODE v4
Alternative transcript names: NONHSAT076769
Alternative gene names: LCAL4; TCONS_00003105


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.7841 non-coding 
CPAT coding probability 4.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01614:4 no no no no

Available literature

  1. White (2014), Transcriptome sequencing reveals altered long intergenic non-coding RNAs in lung cancer., Genome Biol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM169-3:2
4.0 LINC01614:4
4.1 LINC01614:4
5.0 LINC01614:4
5.1 LINC01614:4
5.2 LINC01614:4