Transcript: LINC01619:8

Basic information

LNCipedia transcript ID: LINC01619:8 
HGNC Gene Symbol: LINC01619    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1619
Ensembl Gene ID: ENSG00000257242
Ensembl Transcript ID: ENST00000551843
RefSeq ID: NR_046159
Location (hg38): chr12:91984976-92141713
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 2205 bp
Exons: 6
Sources: NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT029871; NR_046159; ENST00000551843.5; NR_046159.2
Alternative gene names: ENSG00000257242.7; LINC01619;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.8963 non-coding 
CPAT coding probability 8.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01619:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-24B21.1.1-2:4
4.0 LINC01619:8
4.1 LINC01619:8
5.0 LINC01619:8
5.1 LINC01619:8
5.2 LINC01619:8