Transcript: LINC01623:2

Basic information

LNCipedia transcript ID: LINC01623:2 
LNCipedia gene ID: LINC01623
RefSeq ID: NR_033379
Location (hg38): chr6:28859625-28863677
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2785 bp
Exons: 2
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT108488; NR_033379; NR_033379.1
Alternative gene names: ; LINC01623


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 65.0004 coding 
CPAT coding probability 40.93% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01623:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TRIM27-3:4
4.0 LINC01623:2
4.1 LINC01623:2
5.0 LINC01623:2
5.1 LINC01623:2
5.2 LINC01623:2