Transcript: LINC01624:5

Basic information

LNCipedia transcript ID: LINC01624:5 
LNCipedia gene ID: LINC01624
RefSeq ID: NR_104177
Location (hg38): chr6:170272474-170279469
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3218 bp
Exons: 2
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104177.1
Alternative gene names: LINC01624


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -27.2384 non-coding 
CPAT coding probability 7.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01624:5 no no no no

Available literature

  1. Wang (2015), Expression profile of long non-coding RNAs in pancreatic cancer and their clinical significance as biomarkers., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01624:5
5.1 LINC01624:5
5.2 LINC01624:5