Transcript: LINC01625:4

Basic information

LNCipedia transcript ID: LINC01625:4 
LNCipedia gene ID: LINC01625
Location (hg38): chr6:139457676-139472972
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 292 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00012804
Alternative gene names: XLOC_005856; linc-CITED2-2; TCONS_00011139


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -146.9019 non-coding 
CPAT coding probability 5.86% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01625:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CITED2-1:4
3.1 lnc-CITED2-1:4
4.0 LINC01625:4
4.1 LINC01625:4
5.0 LINC01625:4
5.1 LINC01625:4
5.2 LINC01625:4