Transcript: LINC01628:5

Basic information

LNCipedia transcript ID: LINC01628:5 
LNCipedia gene ID: LINC01628
RefSeq ID: NR_110600
Location (hg38): chr2:66921510-66922490
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 430 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110600.1
Alternative gene names: LINC01628


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -223.1449 non-coding 
CPAT coding probability 0.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01628:5 no no no no

Available literature

  1. Tang (2015), Three circulating long non-coding RNAs act as biomarkers for predicting NSCLC., Cell. Physiol. Biochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01628:5
5.1 LINC01628:5
5.2 LINC01628:5