Transcript: LINC01634:4

Basic information

LNCipedia transcript ID: LINC01634:4 
HGNC Gene Symbol: LINC01634    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1634
Ensembl Gene ID: ENSG00000235295
Ensembl Transcript ID: ENST00000443243
RefSeq ID: NR_024417
Location (hg38): chr22:18029385-18037968
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2379 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: TCONS_00029318; ENST00000443243; ENST00000443243.1; XXbac-B476C20.17-001; OTTHUMT00000331424.1; NONHSAT083250; NR_024417; NR_024417.1
Alternative gene names: XLOC_014145; linc-PEX26-1; ENSG00000235295; XXbac-B476C20.17; ENSG00000235295.1; OTTHUMG00000153506.1; FLJ41941; LINC01634


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.8241 non-coding 
CPAT coding probability 45.29% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01634:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PEX26-1:1
3.1 lnc-PEX26-1:1
4.0 lnc-PEX26-1:1
4.1 lnc-PEX26-1:1
5.0 lnc-PEX26-1:1
5.1 LINC01634:2
5.2 LINC01634:4