Transcript: LINC01638:20

Basic information

LNCipedia transcript ID: LINC01638:20 
LNCipedia gene ID: LINC01638
Location (hg38): chr22:27223297-27224679
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 574 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233521.1|ENST00000418271.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -89.9682 non-coding 
CPAT coding probability 5.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01638:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MN1-6:10
5.0 lnc-MN1-6:10
5.1 LINC01638:10
5.2 LINC01638:20