Transcript: LINC01649:13

Basic information

LNCipedia transcript ID: LINC01649:13 
LNCipedia gene ID: LINC01649
Location (hg38): chr1:115930891-115931515
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 294 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001115; NONHSAT005403
Alternative gene names: XLOC_000361; linc-SLC22A15-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.9299 non-coding 
CPAT coding probability 25.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01649:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SLC22A15-1:1
3.1 lnc-SLC22A15-1:1
4.0 lnc-SLC22A15-2:6
4.1 lnc-SLC22A15-2:6
5.0 lnc-SLC22A15-2:6
5.1 LINC01649:7
5.2 LINC01649:13