Transcript: LINC01658:8

Basic information

LNCipedia transcript ID: LINC01658:8 
LNCipedia gene ID: LINC01658
Location (hg38): chr22:23469994-23486906
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 720 bp
Exons: 9
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000539460; ENST00000539460.1; AP000345.1-201
Alternative gene names: ENSG00000178248; AP000345.1; ENSG00000178248.10; OTTHUMG00000150669.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 17.0919 non-coding 
CPAT coding probability 99.82% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01658:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IGLL1-2:2
3.1 lnc-IGLL1-2:2
4.0 lnc-IGLL1-2:2
4.1 lnc-IGLL1-2:2
5.0 lnc-IGLL1-2:2
5.1 LINC01658:4
5.2 LINC01658:8