Transcript: LINC01666:4

Basic information

LNCipedia transcript ID: LINC01666:4 
HGNC Gene Symbol: LINC01666    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1666
Ensembl Gene ID: ENSG00000279579
Ensembl Transcript ID: ENST00000623794
Location (hg38): chr21:8759077-8761335
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 845 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000623794.3
Alternative gene names: ENSG00000279579.3; bP-2189O9.3; LINC01666


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.0453 non-coding 
CPAT coding probability 3.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01666:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CR381653.1-7:1
4.1 lnc-CR381653.1-7:1
5.0 lnc-CR381653.1-7:1
5.1 LINC01666:2
5.2 LINC01666:4