Transcript: LINC01666:5

Basic information

LNCipedia transcript ID: LINC01666:5 
HGNC Gene Symbol: LINC01666    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1666
Ensembl Gene ID: ENSG00000279579
Ensembl Transcript ID: ENST00000624813
Location (hg38): chr21:8759081-8761335
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 241 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000624813.1
Alternative gene names: ENSG00000279579.3; bP-2189O9.3; LINC01666


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.0453 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01666:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-CR381653.1-7:2
4.1 lnc-CR381653.1-7:2
5.0 lnc-CR381653.1-7:2
5.1 LINC01666:3
5.2 LINC01666:5