Transcript: LINC01673:8

Basic information

LNCipedia transcript ID: LINC01673:8 
LNCipedia gene ID: LINC01673
Location (hg38): chr21:27638663-27672184
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 557 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028983; NONHSAT081579
Alternative gene names: XLOC_013896; linc-USP16-9


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -106.4844 non-coding 
CPAT coding probability 1.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01673:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP16-7:2
3.1 lnc-USP16-7:2
4.0 lnc-USP16-7:2
4.1 lnc-USP16-7:2
5.0 lnc-USP16-7:2
5.1 LINC01673:4
5.2 LINC01673:8