Transcript: LINC01676:43

Basic information

LNCipedia transcript ID: LINC01676:43 
HGNC Gene Symbol: LINC01676    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1676
Ensembl Gene ID: ENSG00000230768
Ensembl Transcript ID: ENST00000623447
Location (hg38): chr1:105590039-105606003
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 652 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000623447.3
Alternative gene names: ENSG00000230768.7; RP11-251P6.1; LINC01676


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -142.1344 non-coding 
CPAT coding probability 1.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01676:43 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-AMY1B-3:21
4.1 lnc-AMY1B-3:21
5.0 lnc-AMY1B-3:21
5.1 LINC01676:22
5.2 LINC01676:43