Transcript: LINC01677:8

Basic information

LNCipedia transcript ID: LINC01677:8 
HGNC Gene Symbol: LINC01677    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1677
Ensembl Gene ID: ENSG00000233047
Ensembl Transcript ID: ENST00000635636
Location (hg38): chr1:105935332-106028277
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2362 bp
Exons: 7
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000635636.1
Alternative gene names: ENSG00000233047.6; RP11-24P14.1; LINC01677


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.8254 non-coding 
CPAT coding probability 4.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01677:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-VAV3-2:4
4.1 lnc-VAV3-2:4
5.0 lnc-VAV3-2:4
5.1 LINC01677:2
5.2 LINC01677:8