Transcript: LINC01684:13

Basic information

LNCipedia transcript ID: LINC01684:13 
LNCipedia gene ID: LINC01684
RefSeq ID: NR_135521
Location (hg38): chr21:24428740-24445084
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1596 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_135521.1
Alternative gene names: LOC105372751


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -22.4283 non-coding 
CPAT coding probability 1.53% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01684:13 no no no no

Available literature

  1. Sookoian (2017), Genetic variation in long noncoding RNAs and the risk of nonalcoholic fatty liver disease., Oncotarget


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01684:13
5.1 LINC01684:13
5.2 LINC01684:13