Transcript: LINC01688:8

Basic information

LNCipedia transcript ID: LINC01688:8 
LNCipedia gene ID: LINC01688
Location (hg38): chr1:182712670-182714598
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 443 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00001216; NONHSAT008327
Alternative gene names: XLOC_000486; linc-NPL


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -144.6252 non-coding 
CPAT coding probability 1.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01688:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NPL-1:1
3.1 lnc-NPL-1:1
4.0 lnc-NPL-1:1
4.1 lnc-NPL-1:1
5.0 lnc-NPL-1:1
5.1 LINC01688:3
5.2 LINC01688:8