Transcript: LINC01692:5

Basic information

LNCipedia transcript ID: LINC01692:5 
HGNC Gene Symbol: LINC01692    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1692
Ensembl Gene ID: ENSG00000226983
Ensembl Transcript ID: ENST00000441009
RefSeq ID: NR_046198
Location (hg38): chr21:24840550-25057746
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2719 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000441009; ENST00000441009.1; AP000235.2-001; OTTHUMT00000171145.1; NONHSAT081455; NR_046198.3
Alternative gene names: ENSG00000226983; AP000235.2; ENSG00000226983.2; OTTHUMG00000078331.1; LINC01692; LOC339622


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -37.2051 non-coding 
CPAT coding probability 1.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01692:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-JAM2-5:1
3.1 lnc-JAM2-5:1
4.0 lnc-JAM2-5:1
4.1 lnc-JAM2-5:1
5.0 lnc-JAM2-5:1
5.1 LINC01692:2
5.2 LINC01692:5