Transcript: LINC01693:12

Basic information

LNCipedia transcript ID: LINC01693:12 
HGNC Gene Symbol: LINC01693    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1693
Ensembl Gene ID: ENSG00000227764
Ensembl Transcript ID: ENST00000412871
Location (hg38): chr1:211639695-211654581
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1204 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000412871; ENST00000412871.1; RP11-354K1.1-001; OTTHUMT00000089833.1; NONHSAT009307
Alternative gene names: ENSG00000227764; RP11-354K1.1; ENSG00000227764.1; OTTHUMG00000036999.1; LINC01693


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -169.5121 non-coding 
CPAT coding probability 5.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01693:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TRAF5-4:1
3.1 lnc-TRAF5-5:1
4.0 lnc-TRAF5-5:1
4.1 lnc-TRAF5-5:1
5.0 lnc-TRAF5-5:1
5.1 LINC01693:6
5.2 LINC01693:12