Transcript: LINC01697:27

Basic information

LNCipedia transcript ID: LINC01697:27 
LNCipedia gene ID: LINC01697
Location (hg38): chr21:28048525-28130572
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 276 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00029205
Alternative gene names: XLOC_013900; linc-USP16-5


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -142.7353 non-coding 
CPAT coding probability 0.67% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01697:27 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-USP16-3:4
3.1 lnc-USP16-3:4
4.0 lnc-USP16-3:4
4.1 lnc-USP16-3:4
5.0 lnc-USP16-3:4
5.1 LINC01697:6
5.2 LINC01697:27