Transcript: LINC01698:5

Basic information

LNCipedia transcript ID: LINC01698:5 
HGNC Gene Symbol: LINC01698    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1698
Ensembl Gene ID: ENSG00000231648
Ensembl Transcript ID: ENST00000447257
Location (hg38): chr1:209372055-209373559
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 326 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000447257; ENST00000447257.1; RP11-372M18.2-002; OTTHUMT00000088230.1; NONHSAT009205
Alternative gene names: ENSG00000231648; RP11-372M18.2; ENSG00000231648.1; OTTHUMG00000036266.1; LINC01698


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -139.7971 non-coding 
CPAT coding probability 1.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01698:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CAMK1G-2:2
3.1 lnc-CAMK1G-2:2
4.0 lnc-CAMK1G-2:2
4.1 lnc-CAMK1G-2:2
5.0 lnc-CAMK1G-2:2
5.1 LINC01698:3
5.2 LINC01698:5