Transcript: LINC01703:17

Basic information

LNCipedia transcript ID: LINC01703:17 
HGNC Gene Symbol: LINC01703    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1703
Ensembl Gene ID: ENSG00000225518
Ensembl Transcript ID: ENST00000602806
Location (hg38): chr1:226083639-226089496
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 595 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT009872; ENST00000602806.1
Alternative gene names: ENSG00000225518.2; RP11-396C23.2; LINC01703


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 12.7354 non-coding 
CPAT coding probability 1.44% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01703:17 no no no no

Available literature

  1. Qi (2018), The long noncoding RNA <i>lncPARP1</i> contributes to progression of hepatocellular carcinoma through up-regulation of PARP1., Biosci. Rep.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-H3F3A-1:2
4.0 lnc-H3F3A-1:2
4.1 lnc-H3F3A-1:2
5.0 lnc-H3F3A-1:2
5.1 LINC01703:7
5.2 LINC01703:17