Transcript: LINC01703:20

Basic information

LNCipedia transcript ID: LINC01703:20 
LNCipedia gene ID: LINC01703
Location (hg38): chr1:226086881-226090292
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 407 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000412855; ENST00000412855.1; RP11-396C23.2-001; OTTHUMT00000099052.1; NONHSAT009875
Alternative gene names: ENSG00000225518; RP11-396C23.2; ENSG00000225518.1; OTTHUMG00000041341.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -304.6321 non-coding 
CPAT coding probability 0.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01703:20 no no no no

Available literature

  1. Qi (2018), The long noncoding RNA <i>lncPARP1</i> contributes to progression of hepatocellular carcinoma through up-regulation of PARP1., Biosci. Rep.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-H3F3A-1:1
3.1 lnc-H3F3A-1:1
4.0 lnc-H3F3A-1:1
4.1 lnc-H3F3A-1:1
5.0 lnc-H3F3A-1:1
5.1 LINC01703:10
5.2 LINC01703:20