Transcript: LINC01712:7

Basic information

LNCipedia transcript ID: LINC01712:7 
LNCipedia gene ID: LINC01712
Location (hg38): chr1:83446053-83454771
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 736 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000446227; ENST00000446227.1; RP11-413G15.1-001; OTTHUMT00000026942.1
Alternative gene names: ENSG00000231364; RP11-413G15.1; ENSG00000231364.1; OTTHUMG00000009772.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -141.198 non-coding 
CPAT coding probability 0.24% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01712:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRKACB-3:1
3.1 lnc-PRKACB-3:1
4.0 lnc-PRKACB-3:1
4.1 lnc-PRKACB-3:1
5.0 lnc-PRKACB-3:1
5.1 LINC01712:3
5.2 LINC01712:7