Transcript: LINC01714:37

Basic information

LNCipedia transcript ID: LINC01714:37 
LNCipedia gene ID: LINC01714
Location (hg38): chr1:8208672-8215208
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 495 bp
Exons: 4
Sources: Refseq - Dec 2014
Alternative transcript names: NR_125998
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -46.0469 non-coding 
CPAT coding probability 5.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01714:37 no no no no

Available literature

  1. Malouf (2015), Characterization of long non-coding RNA transcriptome in clear-cell renal cell carcinoma by next-generation deep sequencing., Mol Oncol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SLC45A1-2:2
4.0 lnc-SLC45A1-2:2
4.1 lnc-PARK7-1:18
5.0 lnc-PARK7-1:18
5.1 LINC01714:19
5.2 LINC01714:37