Transcript: LINC01719:23

Basic information

LNCipedia transcript ID: LINC01719:23 
LNCipedia gene ID: LINC01719
Location (hg38): chr1:146052603-146058880
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 818 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000433081; ENST00000433081.1; RP11-458D21.1-001; OTTHUMT00000100475.1; NONHSAT005890
Alternative gene names: ENSG00000233396; RP11-458D21.1; ENSG00000233396.1; OTTHUMG00000042244.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -17.8509 non-coding 
CPAT coding probability 1.87% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01719:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-POLR3GL-1:1
3.1 lnc-POLR3GL-1:1
4.0 lnc-POLR3GL-1:1
4.1 lnc-POLR3GL-1:1
5.0 lnc-POLR3GL-1:1
5.1 LINC01719:5
5.2 LINC01719:23