Transcript: LINC01719:26

Basic information

LNCipedia transcript ID: LINC01719:26 
HGNC Gene Symbol: LINC01719    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1719
Ensembl Gene ID: ENSG00000233396
Ensembl Transcript ID: ENST00000619720
Location (hg38): chr1:146052622-146061705
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 538 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000421937.3; ENST00000619720.1
Alternative gene names: ENSG00000233396.3; RP11-458D21.1; ENSG00000233396.7; LINC01719


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -8.4478 non-coding 
CPAT coding probability 4.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC01719:26 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POLR3GL-1:8
4.0 lnc-POLR3GL-1:8
4.1 lnc-POLR3GL-1:8
5.0 lnc-POLR3GL-1:8
5.1 LINC01719:8
5.2 LINC01719:26