Transcript: LINC01719:33

Basic information

LNCipedia transcript ID: LINC01719:33 
HGNC Gene Symbol: LINC01719    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1719
Ensembl Gene ID: ENSG00000233396
Ensembl Transcript ID: ENST00000457465
Location (hg38): chr1:146057694-146061706
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 656 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000457465.3
Alternative gene names: ENSG00000233396.3; RP11-458D21.1; ENSG00000233396.7; LINC01719


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -3.0924 non-coding 
CPAT coding probability 0.72% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01719:33 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POLR3GL-1:10
4.0 lnc-POLR3GL-1:10
4.1 lnc-POLR3GL-1:10
5.0 lnc-POLR3GL-1:10
5.1 LINC01719:15
5.2 LINC01719:33