Transcript: LINC01719:36

Basic information

LNCipedia transcript ID: LINC01719:36 
LNCipedia gene ID: LINC01719
Location (hg38): chr1:146059451-146061948
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 666 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000421937.1; RP11-458D21.2-001; OTTHUMT00000100473.1
Alternative gene names: ENSG00000227280.1; RP11-458D21.2; OTTHUMG00000042242.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -8.4478 non-coding 
CPAT coding probability 0.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01719:36 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-POLR3GL-2:1
4.0 lnc-POLR3GL-1:17
4.1 lnc-POLR3GL-1:17
5.0 lnc-POLR3GL-1:17
5.1 LINC01719:18
5.2 LINC01719:36