Transcript: LINC01735:3

Basic information

LNCipedia transcript ID: LINC01735:3 
HGNC Gene Symbol: LINC01735    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1735
Ensembl Gene ID: ENSG00000261453
Ensembl Transcript ID: ENST00000568112
Location (hg38): chr1:208607100-208612192
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 279 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000568112.1; RP11-565N2.1-001; OTTHUMT00000088021.1; NONHSAT009170
Alternative gene names: ENSG00000261453.1; RP11-565N2.1; OTTHUMG00000036132.1; LINC01735


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -177.6877 non-coding 
CPAT coding probability 5.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01735:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLXNA2-2:1
4.0 lnc-PLXNA2-2:1
4.1 lnc-PLXNA2-2:1
5.0 lnc-PLXNA2-2:1
5.1 LINC01735:2
5.2 LINC01735:3