Transcript: LINC01740:5

Basic information

LNCipedia transcript ID: LINC01740:5 
LNCipedia gene ID: LINC01740
RefSeq ID: NR_125985
Location (hg38): chr1:212545694-212556066
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 333 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125985; NR_125985.1
Alternative gene names: LOC101929565


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -70.7671 non-coding 
CPAT coding probability 0.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01740:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATF3-2:2
4.0 lnc-ATF3-2:2
4.1 lnc-ATF3-2:2
5.0 lnc-ATF3-2:2
5.1 LINC01740:3
5.2 LINC01740:5