Transcript: LINC01746:6

Basic information

LNCipedia transcript ID: LINC01746:6 
HGNC Gene Symbol: LINC01746    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1746
Ensembl Gene ID: ENSG00000274469
Ensembl Transcript ID: ENST00000621390
Location (hg38): chr20:37571103-37583935
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 449 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000621390.1
Alternative gene names: ENSG00000274469.1; RP11-425M5.8; LINC01746


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -515.338 non-coding 
CPAT coding probability 11.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01746:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-NNAT-1:4
4.1 lnc-NNAT-1:4
5.0 lnc-NNAT-1:4
5.1 LINC01746:2
5.2 LINC01746:6