Transcript: LINC01748:18

Basic information

LNCipedia transcript ID: LINC01748:18 
LNCipedia gene ID: LINC01748
Ensembl Gene ID: ENSG00000231252
Ensembl Transcript ID: ENST00000635290
Location (hg38): chr1:60660227-60867998
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2012 bp
Exons: 9
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000635290.1
Alternative gene names: ENSG00000231252.2; RP11-436K8.1; AC099792.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -48.2584 non-coding 
CPAT coding probability 11.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01748:18 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-C1orf87-3:2
4.1 lnc-C1orf87-2:8
5.0 lnc-C1orf87-2:8
5.1 LINC01748:2
5.2 LINC01748:18