Transcript: LINC01750:15

Basic information

LNCipedia transcript ID: LINC01750:15 
HGNC Gene Symbol: LINC01750    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1750
Ensembl Gene ID: ENSG00000231437
Ensembl Transcript ID: ENST00000438293
Location (hg38): chr1:111990536-111998842
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3068 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000438293; ENST00000438293.1; RP11-88H9.1-001; OTTHUMT00000033147.1
Alternative gene names: ENSG00000231437; RP11-88H9.1; ENSG00000231437.2; OTTHUMG00000011991.1; ENSG00000231437.3; RP11-88H9.2; LINC01750


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -39.5939 non-coding 
CPAT coding probability 28.35% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01750:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-DDX20-2:3
3.1 lnc-DDX20-3:3
4.0 lnc-DDX20-3:3
4.1 lnc-DDX20-3:3
5.0 lnc-DDX20-3:3
5.1 LINC01750:8
5.2 LINC01750:15