Transcript: LINC01754:9

Basic information

LNCipedia transcript ID: LINC01754:9 
HGNC Gene Symbol: LINC01754    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1754
Ensembl Gene ID: ENSG00000224565
Ensembl Transcript ID: ENST00000437920
Location (hg38): chr20:47391929-47412327
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 750 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000437920; ENST00000437920.1; RP1-148H17.1-001; OTTHUMT00000079600.1; NONHSAT080056
Alternative gene names: ENSG00000224565; RP1-148H17.1; ENSG00000224565.1; OTTHUMG00000032669.1; LINC01754


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.601 non-coding 
CPAT coding probability 7.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01754:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZMYND8-1:1
3.1 lnc-ZMYND8-1:1
4.0 lnc-ZMYND8-1:1
4.1 lnc-ZMYND8-1:1
5.0 lnc-ZMYND8-1:1
5.1 LINC01754:5
5.2 LINC01754:9