Transcript: LINC01759:12

Basic information

LNCipedia transcript ID: LINC01759:12 
LNCipedia gene ID: LINC01759
RefSeq ID: NR_132738
Location (hg38): chr1:9182204-9192086
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 982 bp
Exons: 3
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_132738.1
Alternative gene names: LOC102724571


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -32.4498 non-coding 
CPAT coding probability 8.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01759:12 no no no no

Available literature

  1. Grossi (2018), A lncRNA GUARDINg genome integrity., Nat. Cell Biol.
  2. Léveillé (2015), Genome-wide profiling of p53-regulated enhancer RNAs uncovers a subset of enhancers controlled by a lncRNA., Nat Commun


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LINC01759:12
5.1 LINC01759:12
5.2 LINC01759:12