Transcript: LINC01762:41

Basic information

LNCipedia transcript ID: LINC01762:41 
LNCipedia gene ID: LINC01762
RefSeq ID: NR_125973
Location (hg38): chr1:116453034-116478826
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 437 bp
Exons: 4
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_125973; NR_125973.1
Alternative gene names: LOC101929023


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -163.9978 non-coding 
CPAT coding probability 2.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01762:41 no no no no

Available literature

  1. Tørring (2014), Long non-coding RNA expression profiles in hereditary haemorrhagic telangiectasia., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ATP1A1OS-2:12
4.0 lnc-ATP1A1OS-2:12
4.1 lnc-ATP1A1OS-2:12
5.0 lnc-ATP1A1OS-2:12
5.1 LINC01762:17
5.2 LINC01762:41