Transcript: LINC01763:14

Basic information

LNCipedia transcript ID: LINC01763:14 
LNCipedia gene ID: LINC01763
Location (hg38): chr1:90851759-90854286
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 580 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: TCONS_00000246; ENST00000425185; ENST00000425185.1; RP4-665J23.2-001; OTTHUMT00000027727.1; NONHSAT004420
Alternative gene names: XLOC_000293; linc-CDC7; ENSG00000225446; RP4-665J23.2; ENSG00000225446.1; OTTHUMG00000010019.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.838 non-coding 
CPAT coding probability 3.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01763:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CDC7-1:3
3.1 lnc-CDC7-1:3
4.0 lnc-CDC7-1:3
4.1 lnc-CDC7-1:3
5.0 lnc-CDC7-1:3
5.1 LINC01763:5
5.2 LINC01763:14