Transcript: LINC01765:11

Basic information

LNCipedia transcript ID: LINC01765:11 
HGNC Gene Symbol: LINC01765    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1765
Ensembl Gene ID: ENSG00000233730
Ensembl Transcript ID: ENST00000448680
Location (hg38): chr1:115099672-115102658
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 491 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00000280; ENST00000448680; ENST00000448680.1; RP4-666F24.3-001; OTTHUMT00000032831.1; NONHSAT005384
Alternative gene names: XLOC_000357; linc-VANGL1-2; ENSG00000233730; RP4-666F24.3; ENSG00000233730.1; OTTHUMG00000011879.1; LINC01765


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.2496 non-coding 
CPAT coding probability 0.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01765:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TSHB-1:1
3.1 lnc-TSHB-1:1
4.0 lnc-TSHB-1:1
4.1 lnc-TSHB-1:1
5.0 lnc-TSHB-1:1
5.1 LINC01765:6
5.2 LINC01765:11