Transcript: LINC01767:16

Basic information

LNCipedia transcript ID: LINC01767:16 
HGNC Gene Symbol: LINC01767    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1767
Ensembl Gene ID: ENSG00000223956
Ensembl Transcript ID: ENST00000451914
Location (hg38): chr1:56414963-56415966
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 545 bp
Exons: 4
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00000209; ENST00000451914; ENST00000451914.1; RP4-710M16.2-001; OTTHUMT00000022253.1
Alternative gene names: XLOC_000214; linc-PRKAA2-1; ENSG00000223956; RP4-710M16.2; ENSG00000223956.1; OTTHUMG00000008128.1; ENSG00000223956.2; LINC01767


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -216.3648 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01767:16 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRKAA2-1:1
3.1 lnc-PRKAA2-1:1
4.0 lnc-PRKAA2-1:1
4.1 lnc-PRKAA2-1:1
5.0 lnc-PRKAA2-1:1
5.1 LINC01767:5
5.2 LINC01767:16