Transcript: LINC01767:18

Basic information

LNCipedia transcript ID: LINC01767:18 
LNCipedia gene ID: LINC01767
Location (hg38): chr1:56414975-56415927
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 505 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00000955; NONHSAT003447
Alternative gene names: XLOC_000214; linc-PRKAA2-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -216.3648 non-coding 
CPAT coding probability 1.15% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01767:18 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PRKAA2-1:2
3.1 lnc-PRKAA2-1:2
4.0 lnc-PRKAA2-1:2
4.1 lnc-PRKAA2-1:2
5.0 lnc-PRKAA2-1:2
5.1 LINC01767:7
5.2 LINC01767:18