Transcript: LINC01770:15

Basic information

LNCipedia transcript ID: LINC01770:15 
HGNC Gene Symbol: LINC01770    
HGNC Full Gene Name: long intergenic non-protein coding RNA 1770
Ensembl Gene ID: ENSG00000225285
Ensembl Transcript ID: ENST00000417917
Location (hg38): chr1:1430664-1434520
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 634 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000417917.1; RP4-758J18.10-002; OTTHUMT00000008260.1; NONHSAT000327
Alternative gene names: ENSG00000225285.1; RP4-758J18.10; OTTHUMG00000002915.2; LINC01770


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -79.6922 non-coding 
CPAT coding probability 27.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC01770:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ANKRD65-3:2
4.0 lnc-ANKRD65-3:2
4.1 lnc-ANKRD65-3:2
5.0 lnc-ANKRD65-3:2
5.1 LINC01770:6
5.2 LINC01770:15